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LOC120690359 beta-glucuronosyltransferase GlcAT14B-like [ Panicum virgatum (switchgrass) ]

Gene ID: 120690359, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120690359
Gene description
beta-glucuronosyltransferase GlcAT14B-like
Locus tag
PVAP13_9NG152700
Gene type
protein coding
RefSeq status
MODEL
Organism
Panicum virgatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Hiantes
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Genomic context

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See LOC120690359 in Genome Data Viewer
Location:
chromosome: 9N
Exon count:
4
Annotation release Status Assembly Chr Location
100 current P.virgatum_v5 (GCF_016808335.1) 9N NC_053153.1 (12273927..12276863, complement)

Chromosome 9N - NC_053153.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120690357 Neighboring gene uncharacterized LOC120690358 Neighboring gene HIPL1 protein-like Neighboring gene uncharacterized LOC120690362 Neighboring gene uncharacterized protein At4g38062-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053153.1 Chromosome 9N Reference P.virgatum_v5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-glucuronosyltransferase GlcAT14B-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panicum virgatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.virgatum_v5 Primary Assembly

Genomic

  1. NC_053153.1 Reference P.virgatum_v5 Primary Assembly

    Range
    12273927..12276863 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039972989.1 → XP_039828923.1  beta-glucuronosyltransferase GlcAT14B-like

    UniProtKB/TrEMBL
    A0A8T0MFB5, A0A8T0MIW4
    Conserved Domains (1) summary
    cl27418
    Location:75 → 482
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein Strain
Heading Accession and Version

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