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LOC120671181 galactan beta-1,4-galactosyltransferase GALS1-like [ Panicum virgatum (switchgrass) ]

Gene ID: 120671181, updated on 4-Nov-2022

Summary

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Gene symbol
LOC120671181
Gene description
galactan beta-1,4-galactosyltransferase GALS1-like
Locus tag
PVAP13_4NG239022
Gene type
protein coding
RefSeq status
MODEL
Organism
Panicum virgatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Hiantes
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Genomic context

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See LOC120671181 in Genome Data Viewer
Location:
chromosome: 4N
Exon count:
2
Annotation release Status Assembly Chr Location
100 current P.virgatum_v5 (GCF_016808335.1) 4N NC_053148.1 (41765337..41767999)

Chromosome 4N - NC_053148.1Genomic Context describing neighboring genes Neighboring gene cellulose synthase A catalytic subunit 5 [UDP-forming]-like Neighboring gene GDP-mannose transporter GONST3-like Neighboring gene protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1-like Neighboring gene multiple organellar RNA editing factor 2, chloroplastic-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053148.1 Chromosome 4N Reference P.virgatum_v5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
galactan beta-1,4-galactosyltransferase GALS1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panicum virgatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.virgatum_v5 Primary Assembly

Genomic

  1. NC_053148.1 Reference P.virgatum_v5 Primary Assembly

    Range
    41765337..41767999
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039951461.1 → XP_039807395.1  galactan beta-1,4-galactosyltransferase GALS1-like

    UniProtKB/TrEMBL
    A0A8T0TDQ4
    Conserved Domains (1) summary
    cl11394
    Location:237 → 482
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein Strain
Heading Accession and Version

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