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LOC120668898 probable galacturonosyltransferase 3 [ Panicum virgatum (switchgrass) ]

Gene ID: 120668898, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120668898
Gene description
probable galacturonosyltransferase 3
Locus tag
PVAP13_4NG337400
Gene type
protein coding
RefSeq status
MODEL
Organism
Panicum virgatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Hiantes
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Genomic context

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See LOC120668898 in Genome Data Viewer
Location:
chromosome: 4N
Exon count:
8
Annotation release Status Assembly Chr Location
100 current P.virgatum_v5 (GCF_016808335.1) 4N NC_053148.1 (50009836..50013048, complement)

Chromosome 4N - NC_053148.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein ZAT2-like Neighboring gene catalase isozyme B-like Neighboring gene probable serine/threonine-protein kinase PIX13 Neighboring gene uncharacterized LOC120670296

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053148.1 Chromosome 4N Reference P.virgatum_v5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panicum virgatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.virgatum_v5 Primary Assembly

Genomic

  1. NC_053148.1 Reference P.virgatum_v5 Primary Assembly

    Range
    50009836..50013048 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039948703.1 → XP_039804637.1  probable galacturonosyltransferase 3

    UniProtKB/TrEMBL
    A0A8T0TAS2
    Conserved Domains (1) summary
    PLN02910
    Location:76 → 694
    PLN02910; polygalacturonate 4-alpha-galacturonosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases