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LOC120665668 conserved oligomeric Golgi complex subunit 5-like [ Panicum virgatum (switchgrass) ]

Gene ID: 120665668, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120665668
Gene description
conserved oligomeric Golgi complex subunit 5-like
Locus tag
PVAP13_3NG118500
Gene type
protein coding
RefSeq status
MODEL
Organism
Panicum virgatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Hiantes
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Genomic context

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See LOC120665668 in Genome Data Viewer
Location:
chromosome: 3N
Exon count:
3
Annotation release Status Assembly Chr Location
100 current P.virgatum_v5 (GCF_016808335.1) 3N NC_053147.1 (30949579..30954273)

Chromosome 3N - NC_053147.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120665666 Neighboring gene probable calcium-binding protein CML15 Neighboring gene probable methyltransferase PMT7 Neighboring gene wall-associated receptor kinase-like 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053147.1 Chromosome 3N Reference P.virgatum_v5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panicum virgatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.virgatum_v5 Primary Assembly

Genomic

  1. NC_053147.1 Reference P.virgatum_v5 Primary Assembly

    Range
    30949579..30954273
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039945290.1 → XP_039801224.1  conserved oligomeric Golgi complex subunit 5-like

    UniProtKB/TrEMBL
    A0A8T0U673
Nucleotide Protein Strain
Heading Accession and Version

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