U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC120653853 fucosyltransferase 2-like [ Panicum virgatum (switchgrass) ]

Gene ID: 120653853, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC120653853
Gene description
fucosyltransferase 2-like
Locus tag
PVAP13_1NG472700
Gene type
protein coding
RefSeq status
MODEL
Organism
Panicum virgatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Hiantes
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1N
Exon count:
2
Annotation release Status Assembly Chr Location
100 current P.virgatum_v5 (GCF_016808335.1) 1N NC_053145.1 (62378315..62380561)

Chromosome 1N - NC_053145.1Genomic Context describing neighboring genes Neighboring gene fucosyltransferase 6-like Neighboring gene galactoside 2-alpha-L-fucosyltransferase-like Neighboring gene galactoside 2-alpha-L-fucosyltransferase-like Neighboring gene photosystem I chlorophyll a/b-binding protein 5, chloroplastic-like Neighboring gene U4 spliceosomal RNA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_053145.1 Chromosome 1N Reference P.virgatum_v5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactoside 2-alpha-L-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xyloglucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
fucosyltransferase 2-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Panicum virgatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.virgatum_v5 Primary Assembly

Genomic

  1. NC_053145.1 Reference P.virgatum_v5 Primary Assembly

    Range
    62378315..62380561
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039931538.1 → XP_039787472.1  fucosyltransferase 2-like

    UniProtKB/TrEMBL
    A0A8T0X2D2, A0A8T0XK19
    Conserved Domains (1) summary
    cl16914
    Location:107 → 558
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.