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LOC120648345 probable galacturonosyltransferase-like 1 [ Panicum virgatum (switchgrass) ]

Gene ID: 120648345, updated on 7-Dec-2023

Summary

Gene symbol
LOC120648345
Gene description
probable galacturonosyltransferase-like 1
Locus tag
PVAP13_9KG050700
Gene type
protein coding
RefSeq status
MODEL
Organism
Panicum virgatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Hiantes
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Genomic context

See LOC120648345 in Genome Data Viewer
Location:
chromosome: 9K
Exon count:
1
Annotation release Status Assembly Chr Location
100 current P.virgatum_v5 (GCF_016808335.1) 9K NC_053144.1 (12151668..12152932, complement)

Chromosome 9K - NC_053144.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain-containing protein 17-like Neighboring gene phosphomethylpyrimidine synthase, chloroplastic-like Neighboring gene E3 ubiquitin-protein ligase RNF5-like Neighboring gene uncharacterized LOC120648347

Genomic regions, transcripts, and products

Genomic Sequence:
NC_053144.1 Chromosome 9K Reference P.virgatum_v5 Primary Assembly

General protein information

Preferred Names
probable galacturonosyltransferase-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panicum virgatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.virgatum_v5 Primary Assembly

Genomic

  1. NC_053144.1 Reference P.virgatum_v5 Primary Assembly

    Range
    12151668..12152932 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039925092.1XP_039781026.1  probable galacturonosyltransferase-like 1

    UniProtKB/TrEMBL
    A0A8T0NDF4
    Conserved Domains (1) summary
    pfam01501
    Location:58324
    Glyco_transf_8; Glycosyl transferase family 8