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LOC120641602 alpha-1,3/1,6-mannosyltransferase ALG2-like [ Panicum virgatum (switchgrass) ]

Gene ID: 120641602, updated on 18-Sep-2024

Summary

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Gene symbol
LOC120641602
Gene description
alpha-1,3/1,6-mannosyltransferase ALG2-like
Locus tag
PVAP13_7KG322200
Gene type
protein coding
RefSeq status
MODEL
Organism
Panicum virgatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Hiantes
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Genomic context

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See LOC120641602 in Genome Data Viewer
Location:
chromosome: 7K
Exon count:
8
Annotation release Status Assembly Chr Location
100 current P.virgatum_v5 (GCF_016808335.1) 7K NC_053142.1 (45158821..45161579)

Chromosome 7K - NC_053142.1Genomic Context describing neighboring genes Neighboring gene predicted GPI-anchored protein 58 Neighboring gene vegetative cell wall protein gp1-like Neighboring gene E3 ubiquitin-protein ligase PUB23-like Neighboring gene uncharacterized LOC120643098

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053142.1 Chromosome 7K Reference P.virgatum_v5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3/1,6-mannosyltransferase ALG2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panicum virgatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.virgatum_v5 Primary Assembly

Genomic

  1. NC_053142.1 Reference P.virgatum_v5 Primary Assembly

    Range
    45158821..45161579
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039917790.1 → XP_039773724.1  alpha-1,3/1,6-mannosyltransferase ALG2-like

    UniProtKB/TrEMBL
    A0A8T0QMI6
    Conserved Domains (1) summary
    cd03805
    Location:22 → 407
    GT4_ALG2-like; alpha-1,3/1,6-mannosyltransferase ALG2 and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

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