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NFYB nuclear transcription factor Y subunit beta [ Pteropus giganteus (Indian flying fox) ]

Gene ID: 120614941, updated on 30-Mar-2024

Summary

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Gene symbol
NFYB
Gene description
nuclear transcription factor Y subunit beta
See related
EnsemblRapid:ENSPGIG00000008234
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus giganteus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See NFYB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Ma_sr-lr_union100 (GCF_902729225.1) Unplaced Scaffold NW_024347791.1 (7061048..7077275)

NW_024347791.1Genomic Context describing neighboring genes Neighboring gene pumilio homolog 3-like Neighboring gene uncharacterized LOC120614939 Neighboring gene host cell factor C2 Neighboring gene glycosyltransferase 8 domain containing 2 Neighboring gene 5S ribosomal RNA Neighboring gene thymine DNA glycosylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024347791 Unplaced Scaffold Reference Ma_sr-lr_union100

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CCAAT-binding factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear transcription factor Y subunit beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus giganteus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ma_sr-lr_union100

Genomic

  1. NW_024347791.1 Reference Ma_sr-lr_union100

    Range
    7061048..7077275
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039877922.1 → XP_039733856.1  nuclear transcription factor Y subunit beta isoform X2

    Conserved Domains (1) summary
    pfam00808
    Location:55 → 120
    CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone

  2. XM_039877920.1 → XP_039733854.1  nuclear transcription factor Y subunit beta isoform X1

    Conserved Domains (1) summary
    pfam00808
    Location:57 → 122
    CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone

  3. XM_039877924.1 → XP_039733858.1  nuclear transcription factor Y subunit beta isoform X2

    Conserved Domains (1) summary
    pfam00808
    Location:55 → 120
    CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone

  4. XM_039877923.1 → XP_039733857.1  nuclear transcription factor Y subunit beta isoform X2

    Conserved Domains (1) summary
    pfam00808
    Location:55 → 120
    CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone

  5. XM_039877921.1 → XP_039733855.1  nuclear transcription factor Y subunit beta isoform X1

    Related
    ENSPGIP00000006836.1, ENSPGIT00000010647.1
    Conserved Domains (1) summary
    pfam00808
    Location:57 → 122
    CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone
Nucleotide Protein
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