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SC5D sterol-C5-desaturase [ Pteropus giganteus (Indian flying fox) ]

Gene ID: 120612225, updated on 30-Mar-2024

Summary

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Gene symbol
SC5D
Gene description
sterol-C5-desaturase
See related
EnsemblRapid:ENSPGIG00000014539
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus giganteus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Ma_sr-lr_union100 (GCF_902729225.1) Unplaced Scaffold NW_024345861.1 (4181592..4199388)

NW_024345861.1Genomic Context describing neighboring genes Neighboring gene alpha-tectorin-like Neighboring gene alpha-tectorin-like Neighboring gene 5S ribosomal RNA Neighboring gene sortilin related receptor 1 Neighboring gene nuclear receptor coactivator 6-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024345861 Unplaced Scaffold Reference Ma_sr-lr_union100

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol biosynthetic process via lathosterol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lathosterol oxidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus giganteus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ma_sr-lr_union100

Genomic

  1. NW_024345861.1 Reference Ma_sr-lr_union100

    Range
    4181592..4199388
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039874713.1 → XP_039730647.1  lathosterol oxidase

    Related
    ENSPGIP00000012201.1, ENSPGIT00000018867.1
    Conserved Domains (1) summary
    COG3000
    Location:40 → 257
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]

  2. XM_039874714.1 → XP_039730648.1  lathosterol oxidase

    Conserved Domains (1) summary
    COG3000
    Location:40 → 257
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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