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LOC120609590 mannose-binding protein A-like [ Pteropus giganteus (Indian flying fox) ]

Gene ID: 120609590, updated on 30-Mar-2024

Summary

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Gene symbol
LOC120609590
Gene description
mannose-binding protein A-like
See related
EnsemblRapid:ENSPGIG00000034606
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus giganteus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
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Genomic context

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See LOC120609590 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Ma_sr-lr_union100 (GCF_902729225.1) Unplaced Scaffold NW_024344378.1 (52113322..52118050, complement)

NW_024344378.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 254 Neighboring gene surfactant protein D Neighboring gene 5S ribosomal RNA Neighboring gene pulmonary surfactant-associated protein A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024344378 Unplaced Scaffold Reference Ma_sr-lr_union100

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in surfactant homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-binding protein A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus giganteus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ma_sr-lr_union100

Genomic

  1. NW_024344378.1 Reference Ma_sr-lr_union100

    Range
    52113322..52118050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039872225.1 → XP_039728159.1  mannose-binding protein A-like

    Related
    ENSPGIP00000029979.1, ENSPGIT00000045482.1
    Conserved Domains (1) summary
    cd03591
    Location:136 → 246
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
Nucleotide Protein
Heading Accession and Version

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