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EGR2 early growth response 2 [ Pteropus giganteus (Indian flying fox) ]

Gene ID: 120609416, updated on 30-Mar-2024

Summary

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Gene symbol
EGR2
Gene description
early growth response 2
See related
EnsemblRapid:ENSPGIG00000002955
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus giganteus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See EGR2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Ma_sr-lr_union100 (GCF_902729225.1) Unplaced Scaffold NW_024344378.1 (38988826..38993337, complement)

NW_024344378.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120609415 Neighboring gene 5S ribosomal RNA Neighboring gene 2-aminoethanethiol dioxygenase Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024344378 Unplaced Scaffold Reference Ma_sr-lr_union100

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 SUMO-protein ligase EGR2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus giganteus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ma_sr-lr_union100

Genomic

  1. NW_024344378.1 Reference Ma_sr-lr_union100

    Range
    38988826..38993337 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039871909.1 → XP_039727843.1  E3 SUMO-protein ligase EGR2

    Related
    ENSPGIP00000002506.1, ENSPGIT00000003812.1
    Conserved Domains (4) summary
    COG5048
    Location:364 → 420
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:338 → 360
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:336 → 360
    zf-C2H2; Zinc finger, C2H2 type
    pfam11928
    Location:94 → 166
    DUF3446; Domain of unknown function (DUF3446)
Nucleotide Protein
Heading Accession and Version

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