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NFKB2 nuclear factor kappa B subunit 2 [ Pteropus giganteus (Indian flying fox) ]

Gene ID: 120609155, updated on 30-Mar-2024

Summary

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Gene symbol
NFKB2
Gene description
nuclear factor kappa B subunit 2
See related
EnsemblRapid:ENSPGIG00000001440
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus giganteus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See NFKB2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current Ma_sr-lr_union100 (GCF_902729225.1) Unplaced Scaffold NW_024344378.1 (19072458..19080205, complement)

NW_024344378.1Genomic Context describing neighboring genes Neighboring gene F-box and leucine rich repeat protein 15 Neighboring gene pleckstrin and Sec7 domain containing Neighboring gene uncharacterized LOC120609158 Neighboring gene golgi brefeldin A resistant guanine nucleotide exchange factor 1 Neighboring gene 40S ribosomal protein S24-like Neighboring gene paired like homeodomain 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024344378 Unplaced Scaffold Reference Ma_sr-lr_union100

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to cytokine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear factor NF-kappa-B p100 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus giganteus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ma_sr-lr_union100

Genomic

  1. NW_024344378.1 Reference Ma_sr-lr_union100

    Range
    19072458..19080205 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039871388.1 → XP_039727322.1  nuclear factor NF-kappa-B p100 subunit isoform X2

    Related
    ENSPGIP00000001186.1, ENSPGIT00000001796.1
    Conserved Domains (5) summary
    cd07934
    Location:38 → 221
    RHD-n_NFkB2; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor kappa B2 (NF-kappa B2)
    cd08798
    Location:775 → 850
    Death_NFkB2_p100; Death domain of the Nuclear Factor-KappaB2 precursor protein p100
    PHA03095
    Location:460 → 706
    PHA03095; ankyrin-like protein; Provisional
    cd01177
    Location:228 → 327
    IPT_NFkappaB; IPT domain of the transcription factor NFkappaB and related transcription factors. NFkappaB is considered a central regulator of stress responses, activated by different stressful conditions, including physical stress, oxidative stress, and exposure to ...
    sd00045
    Location:600 → 631
    ANK; ANK repeat [structural motif]

  2. XM_039871387.1 → XP_039727321.1  nuclear factor NF-kappa-B p100 subunit isoform X1

    Conserved Domains (5) summary
    cd07934
    Location:38 → 221
    RHD-n_NFkB2; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor kappa B2 (NF-kappa B2)
    cd08798
    Location:775 → 850
    Death_NFkB2_p100; Death domain of the Nuclear Factor-KappaB2 precursor protein p100
    PHA03095
    Location:460 → 706
    PHA03095; ankyrin-like protein; Provisional
    cd01177
    Location:228 → 327
    IPT_NFkappaB; IPT domain of the transcription factor NFkappaB and related transcription factors. NFkappaB is considered a central regulator of stress responses, activated by different stressful conditions, including physical stress, oxidative stress, and exposure to ...
    sd00045
    Location:600 → 631
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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