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UBXN2B UBX domain protein 2B [ Pteropus giganteus (Indian flying fox) ]

Gene ID: 120607223, updated on 30-Mar-2024

Summary

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Gene symbol
UBXN2B
Gene description
UBX domain protein 2B
See related
EnsemblRapid:ENSPGIG00000004029
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus giganteus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See UBXN2B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Ma_sr-lr_union100 (GCF_902729225.1) Unplaced Scaffold NW_024344240.1 (4795620..4822214, complement)

NW_024344240.1Genomic Context describing neighboring genes Neighboring gene syndecan binding protein Neighboring gene cytochrome P450 7A1 Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene swi5-dependent recombination DNA repair protein 1 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024344240 Unplaced Scaffold Reference Ma_sr-lr_union100

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear membrane reassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UBX domain-containing protein 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus giganteus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ma_sr-lr_union100

Genomic

  1. NW_024344240.1 Reference Ma_sr-lr_union100

    Range
    4795620..4822214 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039868887.1 → XP_039724821.1  UBX domain-containing protein 2B isoform X1

    Related
    ENSPGIP00000003409.1, ENSPGIT00000005234.1
    Conserved Domains (2) summary
    smart00553
    Location:141 → 233
    SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
    cd17161
    Location:251 → 332
    UBX_UBXN2B; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 2B (UBXN2B) and similar proteins

  2. XM_039868888.1 → XP_039724822.1  UBX domain-containing protein 2B isoform X2

    Related
    ENSPGIP00000003417.1, ENSPGIT00000005248.1
    Conserved Domains (1) summary
    pfam08059
    Location:147 → 179
    SEP; SEP domain

RNA

  1. XR_005654100.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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