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KIRREL1 kirre like nephrin family adhesion molecule 1 [ Pteropus giganteus (Indian flying fox) ]

Gene ID: 120598342, updated on 30-Mar-2024

Summary

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Gene symbol
KIRREL1
Gene description
kirre like nephrin family adhesion molecule 1
See related
EnsemblRapid:ENSPGIG00000023634
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus giganteus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See KIRREL1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Ma_sr-lr_union100 (GCF_902729225.1) Unplaced Scaffold NW_024355109.1 (108251..215321, complement)

NW_024355109.1Genomic Context describing neighboring genes Neighboring gene CD1d molecule Neighboring gene 5S ribosomal RNA Neighboring gene uncharacterized LOC120598317 Neighboring gene tubulin alpha-1 chain-like Neighboring gene uncharacterized LOC120598344 Neighboring gene uncharacterized LOC120598345 Neighboring gene Fc receptor-like protein 2 Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024355109 Unplaced Scaffold Reference Ma_sr-lr_union100

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus giganteus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ma_sr-lr_union100

Genomic

  1. NW_024355109.1 Reference Ma_sr-lr_union100

    Range
    108251..215321 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039857118.1 → XP_039713052.1  kin of IRRE-like protein 1 isoform X3

    Related
    ENSPGIP00000020321.1, ENSPGIT00000030990.1
    Conserved Domains (5) summary
    pfam13927
    Location:308 → 389
    Ig_3; Immunoglobulin domain
    cd00096
    Location:325 → 329
    Ig; Ig strand B [structural motif]
    cd05759
    Location:122 → 219
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:407 → 504
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:22 → 116
    Ig; Immunoglobulin domain

  2. XM_039857116.1 → XP_039713050.1  kin of IRRE-like protein 1 isoform X1

    Conserved Domains (4) summary
    smart00409
    Location:332 → 423
    IG; Immunoglobulin
    smart00410
    Location:248 → 322
    IG_like; Immunoglobulin like
    cd00096
    Location:426 → 430
    Ig; Ig strand A [structural motif]
    cl11960
    Location:425 → 522
    Ig; Immunoglobulin domain

  3. XM_039857119.1 → XP_039713053.1  kin of IRRE-like protein 1 isoform X4

    Related
    ENSPGIP00000020378.1, ENSPGIT00000031101.1
    Conserved Domains (5) summary
    pfam13927
    Location:308 → 373
    Ig_3; Immunoglobulin domain
    cd00096
    Location:325 → 329
    Ig; Ig strand B [structural motif]
    cd05759
    Location:122 → 219
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:391 → 488
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:22 → 116
    Ig; Immunoglobulin domain

  4. XM_039857117.1 → XP_039713051.1  kin of IRRE-like protein 1 isoform X2

    Conserved Domains (5) summary
    smart00408
    Location:339 → 391
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:248 → 322
    IG; Immunoglobulin
    smart00410
    Location:45 → 134
    IG_like; Immunoglobulin like
    cd00096
    Location:410 → 414
    Ig; Ig strand A [structural motif]
    cl11960
    Location:409 → 506
    Ig; Immunoglobulin domain
Nucleotide Protein
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