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ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [ Pteropus giganteus (Indian flying fox) ]

Gene ID: 120598122, updated on 30-Mar-2024

Summary

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Gene symbol
ST3GAL6
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 6
See related
EnsemblRapid:ENSPGIG00000024592
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus giganteus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See ST3GAL6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Ma_sr-lr_union100 (GCF_902729225.1) Unplaced Scaffold NW_024355008.1 (389721..456728)

NW_024355008.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA65 Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene discoidin, CUB and LCCL domain containing 2 Neighboring gene 5S ribosomal RNA Neighboring gene 60S ribosomal protein L13-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024355008 Unplaced Scaffold Reference Ma_sr-lr_union100

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type 2 lactosamine alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus giganteus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ma_sr-lr_union100

Genomic

  1. NW_024355008.1 Reference Ma_sr-lr_union100

    Range
    389721..456728
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039856914.1 → XP_039712848.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

  2. XM_039856915.1 → XP_039712849.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

  3. XM_039856913.1 → XP_039712847.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

  4. XM_039856916.1 → XP_039712850.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X2

    Related
    ENSPGIP00000021090.1, ENSPGIT00000032167.1
    Conserved Domains (1) summary
    pfam00777
    Location:85 → 330
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  5. XM_039856917.1 → XP_039712851.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X3

    Conserved Domains (1) summary
    pfam00777
    Location:1 → 186
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

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