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NDST1 N-deacetylase and N-sulfotransferase 1 [ Pteropus giganteus (Indian flying fox) ]

Gene ID: 120581558, updated on 30-Mar-2024

Summary

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Gene symbol
NDST1
Gene description
N-deacetylase and N-sulfotransferase 1
See related
EnsemblRapid:ENSPGIG00000011468
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus giganteus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See NDST1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current Ma_sr-lr_union100 (GCF_902729225.1) Unplaced Scaffold NW_024349802.1 (18197255..18254608)

NW_024349802.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene ribosomal protein S14 Neighboring gene uncharacterized LOC120581562 Neighboring gene synaptopodin Neighboring gene myozenin 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024349802 Unplaced Scaffold Reference Ma_sr-lr_union100

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus giganteus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ma_sr-lr_union100

Genomic

  1. NW_024349802.1 Reference Ma_sr-lr_union100

    Range
    18197255..18254608
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039836558.1 → XP_039692492.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

    Conserved Domains (2) summary
    pfam00685
    Location:605 → 855
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:30 → 515
    HSNSD; heparan sulfate-N-deacetylase

  2. XM_039836557.1 → XP_039692491.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

    Conserved Domains (2) summary
    pfam00685
    Location:605 → 855
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:30 → 515
    HSNSD; heparan sulfate-N-deacetylase

  3. XM_039836559.1 → XP_039692493.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

    Conserved Domains (2) summary
    pfam00685
    Location:605 → 855
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:30 → 515
    HSNSD; heparan sulfate-N-deacetylase

  4. XM_039836560.1 → XP_039692494.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

    Conserved Domains (2) summary
    pfam00685
    Location:605 → 855
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:30 → 515
    HSNSD; heparan sulfate-N-deacetylase

  5. XM_039836561.1 → XP_039692495.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

    Related
    ENSPGIP00000009523.1, ENSPGIT00000014846.1
    Conserved Domains (2) summary
    pfam00685
    Location:605 → 855
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:30 → 515
    HSNSD; heparan sulfate-N-deacetylase
Nucleotide Protein
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