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sgcd sarcoglycan, delta (dystrophin-associated glycoprotein) [ Polypterus senegalus (gray bichir) ]

Gene ID: 120542936, updated on 8-May-2024

Summary

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Gene symbol
sgcd
Gene description
sarcoglycan, delta (dystrophin-associated glycoprotein)
Locus tag
GTO96_0007030
See related
EnsemblRapid:ENSSTSG00000022121
Gene type
protein coding
RefSeq status
MODEL
Organism
Polypterus senegalus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Polypteriformes; Polypteridae; Polypterus
Orthologs
human zebrafish all
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Genomic context

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See sgcd in Genome Data Viewer
Location:
chromosome: 13
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ASM1683550v1 (GCF_016835505.1) 13 NC_053166.1 (31428001..32333470)

Chromosome 13 - NC_053166.1Genomic Context describing neighboring genes Neighboring gene gem (nuclear organelle) associated protein 5 Neighboring gene mitochondrial ribosomal protein L22 Neighboring gene uncharacterized LOC120542937 Neighboring gene rho GTPase-activating protein 7 Neighboring gene arginyl-tRNA synthetase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053166.1 Chromosome 13 Reference ASM1683550v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Polypterus senegalus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1683550v1 Primary Assembly

Genomic

  1. NC_053166.1 Reference ASM1683550v1 Primary Assembly

    Range
    31428001..32333470
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039775688.1 → XP_039631622.1  delta-sarcoglycan

  2. XM_039775689.1 → XP_039631623.1  delta-sarcoglycan

  3. XM_039775692.1 → XP_039631626.1  delta-sarcoglycan

  4. XM_039775690.1 → XP_039631624.1  delta-sarcoglycan

  5. XM_039775687.1 → XP_039631621.1  delta-sarcoglycan

    Related
    ENSSTSP00000051133.1, ENSSTST00000057865.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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