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b3gat2 beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [ Polypterus senegalus (gray bichir) ]

Gene ID: 120516541, updated on 8-May-2024

Summary

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Gene symbol
b3gat2
Gene description
beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
Locus tag
GTO96_0010183
See related
EnsemblRapid:ENSSTSG00000017061
Gene type
protein coding
RefSeq status
MODEL
Organism
Polypterus senegalus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Polypteriformes; Polypteridae; Polypterus
Orthologs
human zebrafish all
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Genomic context

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See b3gat2 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM1683550v1 (GCF_016835505.1) 16 NC_053169.1 (26307013..26369682)

Chromosome 16 - NC_053169.1Genomic Context describing neighboring genes Neighboring gene opioid growth factor receptor-like 1 Neighboring gene uncharacterized LOC120516479 Neighboring gene small ArfGAP 1 Neighboring gene tigger transposable element-derived protein 6-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053169.1 Chromosome 16 Reference ASM1683550v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2
Names
B3GA2 glucuronosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Polypterus senegalus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1683550v1 Primary Assembly

Genomic

  1. NC_053169.1 Reference ASM1683550v1 Primary Assembly

    Range
    26307013..26369682
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039738284.1 → XP_039594218.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2

    UniProtKB/TrEMBL
    A0A8X7XJ39
    Related
    ENSSTSP00000038794.1, ENSSTST00000043480.1
    Conserved Domains (1) summary
    cd00218
    Location:64 → 287
    GlcAT-I; Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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