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INPP5B inositol polyphosphate-5-phosphatase B [ Passer montanus (Eurasian tree sparrow) ]

Gene ID: 120511740, updated on 3-Aug-2024

Summary

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Gene symbol
INPP5B
Gene description
inositol polyphosphate-5-phosphatase B
Gene type
protein coding
RefSeq status
MODEL
Organism
Passer montanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Passer
Orthologs
human mouse all
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Genomic context

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See INPP5B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current ASM1480565v1 (GCF_014805655.1) Unplaced Scaffold NW_024371926.1 (1110185..1124378, complement)

NW_024371926.1Genomic Context describing neighboring genes Neighboring gene yrdC N6-threonylcarbamoyltransferase domain containing Neighboring gene metal regulatory transcription factor 1 Neighboring gene splicing factor 3a subunit 3 Neighboring gene four and a half LIM domains 3 Neighboring gene UTP11 small subunit processome component

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024371926 Unplaced Scaffold Reference ASM1480565v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol-1,4,5-trisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type II inositol 1,4,5-trisphosphate 5-phosphatase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Passer montanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1480565v1 Primary Assembly

Genomic

  1. NW_024371926.1 Reference ASM1480565v1 Primary Assembly

    Range
    1110185..1124378 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039729233.1 → XP_039585167.1  type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X2

    Conserved Domains (3) summary
    cd09093
    Location:213 → 505
    INPP5c_INPP5B; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Type II inositol polyphosphate 5-phosphatase I, Oculocerebrorenal syndrome of Lowe 1, and related proteins
    cd04380
    Location:639 → 859
    RhoGAP_OCRL1; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in OCRL1-like proteins. OCRL1 (oculocerebrorenal syndrome of Lowe 1)-like proteins contain two conserved domains: a central inositol polyphosphate 5-phosphatase domain and ...
    cl17171
    Location:17 → 122
    PH-like; Pleckstrin homology-like domain

  2. XM_039729234.1 → XP_039585168.1  type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X3

    Conserved Domains (3) summary
    cd09093
    Location:214 → 506
    INPP5c_INPP5B; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Type II inositol polyphosphate 5-phosphatase I, Oculocerebrorenal syndrome of Lowe 1, and related proteins
    cd04380
    Location:630 → 850
    RhoGAP_OCRL1; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in OCRL1-like proteins. OCRL1 (oculocerebrorenal syndrome of Lowe 1)-like proteins contain two conserved domains: a central inositol polyphosphate 5-phosphatase domain and ...
    cl17171
    Location:17 → 122
    PH-like; Pleckstrin homology-like domain

  3. XM_039729232.1 → XP_039585166.1  type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X1

    Conserved Domains (3) summary
    cd09093
    Location:214 → 506
    INPP5c_INPP5B; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Type II inositol polyphosphate 5-phosphatase I, Oculocerebrorenal syndrome of Lowe 1, and related proteins
    cd04380
    Location:640 → 860
    RhoGAP_OCRL1; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in OCRL1-like proteins. OCRL1 (oculocerebrorenal syndrome of Lowe 1)-like proteins contain two conserved domains: a central inositol polyphosphate 5-phosphatase domain and ...
    cl17171
    Location:17 → 122
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
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