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FIG4 FIG4 phosphoinositide 5-phosphatase [ Passer montanus (Eurasian tree sparrow) ]

Gene ID: 120510261, updated on 3-Aug-2024

Summary

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Gene symbol
FIG4
Gene description
FIG4 phosphoinositide 5-phosphatase
Gene type
protein coding
RefSeq status
MODEL
Organism
Passer montanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Passer
Orthologs
human mouse all
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Genomic context

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See FIG4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current ASM1480565v1 (GCF_014805655.1) Unplaced Scaffold NW_024357613.1 (2027118..2078640, complement)

NW_024357613.1Genomic Context describing neighboring genes Neighboring gene WASP family member 1 Neighboring gene G protein-coupled receptor 6 Neighboring gene adenylate kinase 9 Neighboring gene zinc finger and BTB domain containing 24 Neighboring gene uncharacterized LOC120511164 Neighboring gene CD164 molecule

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024357613 Unplaced Scaffold Reference ASM1480565v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polyphosphoinositide phosphatase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Passer montanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1480565v1 Primary Assembly

Genomic

  1. NW_024357613.1 Reference ASM1480565v1 Primary Assembly

    Range
    2027118..2078640 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039725878.1 → XP_039581812.1  polyphosphoinositide phosphatase

    Conserved Domains (1) summary
    COG5329
    Location:79 → 642
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
Nucleotide Protein
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