U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RPL39 ribosomal protein L39 [ Passer montanus (Eurasian tree sparrow) ]

Gene ID: 120506116, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
RPL39
Gene description
ribosomal protein L39
Gene type
protein coding
RefSeq status
MODEL
Organism
Passer montanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Passer
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See RPL39 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM1480565v1 (GCF_014805655.1) Unplaced Scaffold NW_024368596.1 (6931143..6933851)

NW_024368596.1Genomic Context describing neighboring genes Neighboring gene A-kinase anchoring protein 14 Neighboring gene NADH:ubiquinone oxidoreductase subunit A1 Neighboring gene UPF3B regulator of nonsense mediated mRNA decay Neighboring gene small nucleolar RNA SNORA69 Neighboring gene sosondowah ankyrin repeat domain family member D Neighboring gene septin 6

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_024368596 Unplaced Scaffold Reference ASM1480565v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
60S ribosomal protein L39

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Passer montanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1480565v1 Primary Assembly

Genomic

  1. NW_024368596.1 Reference ASM1480565v1 Primary Assembly

    Range
    6931143..6933851
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039717267.1 → XP_039573201.1  60S ribosomal protein L39

    Conserved Domains (1) summary
    COG2167
    Location:76 → 123
    RPL39; Ribosomal protein L39E [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.