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dnajb6b DnaJ heat shock protein family (Hsp40) member B6b [ Pimephales promelas (fathead minnow) ]

Gene ID: 120491043, updated on 21-Mar-2024

Summary

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Gene symbol
dnajb6b
Gene description
DnaJ heat shock protein family (Hsp40) member B6b
Locus tag
F2P79_015215
Gene type
protein coding
RefSeq status
MODEL
Organism
Pimephales promelas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pogonichthyinae; Pimephales
Orthologs
human zebrafish all
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Genomic context

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See dnajb6b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current EPA_FHM_2.0 (GCF_016745375.1) Unplaced Scaffold NW_024121333.1 (8747250..8763324, complement)

NW_024121333.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase non-receptor type 5 Neighboring gene uncharacterized LOC120491044 Neighboring gene 5S ribosomal RNA Neighboring gene ubiquitin protein ligase E3C Neighboring gene motor neuron and pancreas homeobox 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024121333 Unplaced Scaffold Reference EPA_FHM_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6b
Names
dnaJ subfamily B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pimephales promelas Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EPA_FHM_2.0 Primary Assembly

Genomic

  1. NW_024121333.1 Reference EPA_FHM_2.0 Primary Assembly

    Range
    8747250..8763324 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039688622.1 → XP_039544556.1  dnaJ homolog subfamily B member 6b

    Conserved Domains (1) summary
    PRK10767
    Location:3 → 133
    PRK10767; chaperone protein DnaJ; Provisional
Nucleotide Protein
Heading Accession and Version

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