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hsd17b1 hydroxysteroid (17-beta) dehydrogenase 1 [ Pimephales promelas (fathead minnow) ]

Gene ID: 120490130, updated on 19-Jun-2024

Summary

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Gene symbol
hsd17b1
Gene description
hydroxysteroid (17-beta) dehydrogenase 1
Locus tag
F2P79_002982
Gene type
protein coding
RefSeq status
MODEL
Organism
Pimephales promelas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pogonichthyinae; Pimephales
Orthologs
human zebrafish all
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Genomic context

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See hsd17b1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current EPA_FHM_2.0 (GCF_016745375.1) Unplaced Scaffold NW_024121321.1 (12384029..12387546, complement)

NW_024121321.1Genomic Context describing neighboring genes Neighboring gene ATP citrate lyase a Neighboring gene coenzyme Q-binding protein COQ10 homolog, mitochondrial Neighboring gene heat shock 70 kDa protein-like Neighboring gene heat shock cognate 70-kd protein, tandem duplicate 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024121321 Unplaced Scaffold Reference EPA_FHM_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables estradiol 17-beta-dehydrogenase [NAD(P)+] activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in estrogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
estradiol 17-beta-dehydrogenase 1
Names
estradiol 17-beta-dehydrogenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pimephales promelas Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EPA_FHM_2.0 Primary Assembly

Genomic

  1. NW_024121321.1 Reference EPA_FHM_2.0 Primary Assembly

    Range
    12384029..12387546 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039687519.1 → XP_039543453.1  estradiol 17-beta-dehydrogenase 1

    Conserved Domains (1) summary
    cl21454
    Location:4 → 257
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

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