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star steroidogenic acute regulatory protein [ Pimephales promelas (fathead minnow) ]

Gene ID: 120474873, updated on 21-Mar-2024

Summary

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Gene symbol
star
Gene description
steroidogenic acute regulatory protein
Locus tag
F2P79_023004
Gene type
protein coding
RefSeq status
MODEL
Organism
Pimephales promelas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pogonichthyinae; Pimephales
Orthologs
human zebrafish all
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Genomic context

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See star in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current EPA_FHM_2.0 (GCF_016745375.1) Unplaced Scaffold NW_024121123.1 (884665..889541)

NW_024121123.1Genomic Context describing neighboring genes Neighboring gene LSM1, U6 small nuclear RNA associated Neighboring gene G protein-coupled receptor kinase 5 like Neighboring gene uncharacterized LOC120474872 Neighboring gene ELMO/CED-12 domain containing 3 Neighboring gene AE binding protein 1b

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024121123 Unplaced Scaffold Reference EPA_FHM_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcription of key genes regulating gonadal steroidogenesis in control and ketoconazole- or vinclozolin-exposed fathead minnows. Villeneuve DL, et al. Toxicol Sci, 2007 Aug. PMID 17517826
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cholesterol transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular cholesterol transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of steroid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in steroid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial intermembrane space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
steroidogenic acute regulatory protein, mitochondrial
Names
stAR-related lipid transfer protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pimephales promelas Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EPA_FHM_2.0 Primary Assembly

Genomic

  1. NW_024121123.1 Reference EPA_FHM_2.0 Primary Assembly

    Range
    884665..889541
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039665495.1 → XP_039521429.1  steroidogenic acute regulatory protein, mitochondrial

    UniProtKB/TrEMBL
    Q2HZ17
    Conserved Domains (1) summary
    cd08905
    Location:68 → 276
    START_STARD1-like; Cholesterol-binding START domain of mammalian STARD1 and related proteins
Nucleotide Protein
Heading Accession and Version

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