U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

lman2la lectin, mannose-binding 2-like a [ Pimephales promelas (fathead minnow) ]

Gene ID: 120472014, updated on 19-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
lman2la
Gene description
lectin, mannose-binding 2-like a
Locus tag
F2P79_007645
Gene type
protein coding
RefSeq status
MODEL
Organism
Pimephales promelas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pogonichthyinae; Pimephales
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See lman2la in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current EPA_FHM_2.0 (GCF_016745375.1) Unplaced Scaffold NW_024121987.1 (22465109..22471641)

NW_024121987.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120472333 Neighboring gene mitochondrial fission process 1 Neighboring gene WW domain binding protein 1 Neighboring gene paired box 8 Neighboring gene PH and SEC7 domain-containing protein 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_024121987 Unplaced Scaffold Reference EPA_FHM_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
lectin, mannose-binding 2-like a
Names
VIP36-like protein
vesicular integral-membrane protein VIP36

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Pimephales promelas Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EPA_FHM_2.0 Primary Assembly

Genomic

  1. NW_024121987.1 Reference EPA_FHM_2.0 Primary Assembly

    Range
    22465109..22471641
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039662000.1 → XP_039517934.1  lectin, mannose-binding 2-like a

    Conserved Domains (1) summary
    cl14058
    Location:27 → 286
    lectin_L-type; legume lectins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.