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LOC120465073 mannose-binding protein A-like [ Pimephales promelas (fathead minnow) ]

Gene ID: 120465073, updated on 7-Aug-2021

Summary

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Gene symbol
LOC120465073
Gene description
mannose-binding protein A-like
Locus tag
F2P79_019624
Gene type
protein coding
RefSeq status
MODEL
Organism
Pimephales promelas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pogonichthyinae; Pimephales
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Genomic context

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See LOC120465073 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current EPA_FHM_2.0 (GCF_016745375.1) Unplaced Scaffold NW_024121732.1 (2177084..2179818, complement)

NW_024121732.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120465072 Neighboring gene cerebellin 13 Neighboring gene telomerase-associated protein 1 Neighboring gene sentrin-specific protease 6-like Neighboring gene uncharacterized LOC120465068

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024121732 Unplaced Scaffold Reference EPA_FHM_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
mannose-binding protein A-like
Names
mannose-binding protein C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pimephales promelas Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EPA_FHM_2.0 Primary Assembly

Genomic

  1. NW_024121732.1 Reference EPA_FHM_2.0 Primary Assembly

    Range
    2177084..2179818 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039654675.1 → XP_039510609.1  mannose-binding protein A-like isoform X2

    Conserved Domains (1) summary
    cd03591
    Location:128 → 242
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)

  2. XM_039654673.1 → XP_039510607.1  mannose-binding protein A-like isoform X1

    Conserved Domains (2) summary
    cd03591
    Location:131 → 245
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:33 → 91
    Collagen; Collagen triple helix repeat (20 copies)
Nucleotide Protein
Heading Accession and Version

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