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LOC120460716 C-terminal binding protein 1 [ Pimephales promelas (fathead minnow) ]

Gene ID: 120460716, updated on 21-Mar-2024

Summary

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Gene symbol
LOC120460716
Gene description
C-terminal binding protein 1
Locus tag
F2P79_004869
Gene type
protein coding
RefSeq status
MODEL
Organism
Pimephales promelas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pogonichthyinae; Pimephales
Orthologs
zebrafish all
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Genomic context

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See LOC120460716 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current EPA_FHM_2.0 (GCF_016745375.1) Unplaced Scaffold NW_024121543.1 (18151856..18181320, complement)

NW_024121543.1Genomic Context describing neighboring genes Neighboring gene lysine-specific demethylase 3B-like Neighboring gene spondin 2a, extracellular matrix protein Neighboring gene ankyrin repeat domain 13 family, member D Neighboring gene lysine (K)-specific demethylase 2Ab

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024121543 Unplaced Scaffold Reference EPA_FHM_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1
Names
C-terminal-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pimephales promelas Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EPA_FHM_2.0 Primary Assembly

Genomic

  1. NW_024121543.1 Reference EPA_FHM_2.0 Primary Assembly

    Range
    18151856..18181320 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039648641.1 → XP_039504575.1  C-terminal-binding protein 1

    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_039648642.1 → XP_039504576.1  C-terminal-binding protein 1

    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
Heading Accession and Version

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