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Uch-L5 ubiquitin carboxy-terminal hydrolase L5 [ Culex pipiens pallens (northern house mosquito) ]

Gene ID: 120430342, updated on 22-May-2024

Summary

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Gene symbol
Uch-L5
Gene description
ubiquitin carboxy-terminal hydrolase L5
See related
EnsemblRapid:LOC120430342
Gene type
protein coding
RefSeq status
MODEL
Organism
Culex pipiens pallens (sub-species: pallens)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex
Orthologs
fruit fly all
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Genomic context

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See Uch-L5 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2022_12 current TS_CPP_V2 (GCF_016801865.2) 3 NC_068939.1 (88941565..88942788, complement)
100 previous assembly TS_Cpip_V1 (GCF_016801865.1) Unplaced Scaffold NW_024109866.1 (65953..67169)

Chromosome 3 - NC_068939.1Genomic Context describing neighboring genes Neighboring gene coatomer subunit epsilon-like Neighboring gene uncharacterized LOC120430337 Neighboring gene queuine tRNA-ribosyltransferase accessory subunit 2 Neighboring gene Jumonji, AT rich interactive domain 2 Neighboring gene uncharacterized LOC120430338

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase isozyme L5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016801865.2-RS_2022_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS_CPP_V2 Primary Assembly

Genomic

  1. NC_068939.1 Reference TS_CPP_V2 Primary Assembly

    Range
    88941565..88942788 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039595445.2 → XP_039451379.1  ubiquitin carboxyl-terminal hydrolase isozyme L5

    UniProtKB/TrEMBL
    A0A8D8IAW1
    Related
    XP_039451379.1, XM_039595445.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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