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LOC120420432 histone H2A-beta, sperm-like [ Culex pipiens pallens (northern house mosquito) ]

Gene ID: 120420432, updated on 9-Apr-2024

Summary

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Gene symbol
LOC120420432
Gene description
histone H2A-beta, sperm-like
See related
EnsemblRapid:LOC120420432
Gene type
protein coding
RefSeq status
MODEL
Organism
Culex pipiens pallens (sub-species: pallens)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex
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Genomic context

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See LOC120420432 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2022_12 current TS_CPP_V2 (GCF_016801865.2) 2 NC_068938.1 (151955464..151956303)
100 previous assembly TS_Cpip_V1 (GCF_016801865.1) Unplaced Scaffold NW_024109196.1 (46944..47811, complement)

Chromosome 2 - NC_068938.1Genomic Context describing neighboring genes Neighboring gene ubiquitin carboxyl-terminal hydrolase calypso Neighboring gene transmembrane protein 42 Neighboring gene uncharacterized LOC120420427 Neighboring gene transmembrane reductase CYB561D2-like Neighboring gene uncharacterized LOC120420417 Neighboring gene ubiquitin protein ligase E3A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone H2A-beta, sperm-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016801865.2-RS_2022_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TS_CPP_V2 Primary Assembly

Genomic

  1. NC_068938.1 Reference TS_CPP_V2 Primary Assembly

    Range
    151955464..151956303
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039583455.2 → XP_039439389.1  histone H2A-beta, sperm-like

    UniProtKB/TrEMBL
    A0A8D8JTX3
    Related
    XP_039439389.1, XM_039583455.2
    Conserved Domains (1) summary
    cd00074
    Location:2 → 112
    H2A; Histone 2A; H2A is a subunit of the nucleosome. The nucleosome is an octamer containing two H2A, H2B, H3, and H4 subunits. The H2A subunit performs essential roles in maintaining structural integrity of the nucleosome, chromatin condensation, and binding ...
Nucleotide Protein
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