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CPTP ceramide-1-phosphate transfer protein [ Corvus cornix cornix ]

Gene ID: 120411106, updated on 3-Aug-2024

Summary

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Gene symbol
CPTP
Gene description
ceramide-1-phosphate transfer protein
See related
EnsemblRapid:ENSCCCG00025000743
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See CPTP in Genome Data Viewer
Location:
chromosome: 21
Exon count:
2
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) 21 NC_046350.1 (4943970..4946359, complement)

Chromosome 21 - NC_046350.1Genomic Context describing neighboring genes Neighboring gene dishevelled segment polarity protein 1 Neighboring gene taste 1 receptor member 3 Neighboring gene lysophosphatidic acid receptor 6-like Neighboring gene integrator complex subunit 11 Neighboring gene pseudouridine synthase like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046350.1 Chromosome 21 Reference ASM73873v5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ceramide 1-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ceramide 1-phosphate transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intermembrane lipid transfer IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide-1-phosphate transfer protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046350.1 Reference ASM73873v5 Primary Assembly

    Range
    4943970..4946359 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039563996.1 → XP_039419930.1  ceramide-1-phosphate transfer protein

    Related
    ENSCCCP00025001337.1, ENSCCCT00025001497.1
    Conserved Domains (1) summary
    pfam08718
    Location:32 → 170
    GLTP; Glycolipid transfer protein (GLTP)
Nucleotide Protein
Heading Accession and Version

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