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RGMB repulsive guidance molecule BMP co-receptor b [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120408258, updated on 21-Mar-2024

Summary

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Gene symbol
RGMB
Gene description
repulsive guidance molecule BMP co-receptor b
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See RGMB in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 6 NC_052628.1 (59581603..59610490)

Linkage Group 6 - NC_052628.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120407465 Neighboring gene uncharacterized LOC120407463 Neighboring gene uncharacterized LOC120407464 Neighboring gene chromodomain helicase DNA binding protein 1 Neighboring gene uncharacterized LOC120408245

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052628.1 Chromosome 6 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables coreceptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RGM domain family member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052628.1 Reference ASM1616193v1 Primary Assembly

    Range
    59581603..59610490
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039544970.1 → XP_039400904.1  RGM domain family member B isoform X3

    Conserved Domains (2) summary
    pfam06534
    Location:256 → 347
    RGM_C; Repulsive guidance molecule (RGM) C-terminus
    pfam06535
    Location:84 → 251
    RGM_N; Repulsive guidance molecule (RGM) N-terminus

  2. XM_039544968.1 → XP_039400902.1  RGM domain family member B isoform X2

    Conserved Domains (2) summary
    pfam06534
    Location:221 → 395
    RGM_C; Repulsive guidance molecule (RGM) C-terminus
    pfam06535
    Location:49 → 216
    RGM_N; Repulsive guidance molecule (RGM) N-terminus

  3. XM_039544965.1 → XP_039400899.1  RGM domain family member B isoform X1

    Conserved Domains (2) summary
    pfam06534
    Location:256 → 430
    RGM_C; Repulsive guidance molecule (RGM) C-terminus
    pfam06535
    Location:84 → 251
    RGM_N; Repulsive guidance molecule (RGM) N-terminus

  4. XM_039544966.1 → XP_039400900.1  RGM domain family member B isoform X1

    Conserved Domains (2) summary
    pfam06534
    Location:256 → 430
    RGM_C; Repulsive guidance molecule (RGM) C-terminus
    pfam06535
    Location:84 → 251
    RGM_N; Repulsive guidance molecule (RGM) N-terminus

  5. XM_039544969.1 → XP_039400903.1  RGM domain family member B isoform X2

    Conserved Domains (2) summary
    pfam06534
    Location:221 → 395
    RGM_C; Repulsive guidance molecule (RGM) C-terminus
    pfam06535
    Location:49 → 216
    RGM_N; Repulsive guidance molecule (RGM) N-terminus

  6. XM_039544967.1 → XP_039400901.1  RGM domain family member B isoform X1

    Conserved Domains (2) summary
    pfam06534
    Location:256 → 430
    RGM_C; Repulsive guidance molecule (RGM) C-terminus
    pfam06535
    Location:84 → 251
    RGM_N; Repulsive guidance molecule (RGM) N-terminus
Nucleotide Protein
Heading Accession and Version

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