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CTBP1 C-terminal binding protein 1 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120406401, updated on 21-Mar-2024

Summary

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Gene symbol
CTBP1
Gene description
C-terminal binding protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See CTBP1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
16
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 5 NC_052627.1 (123337045..123612023)

Linkage Group 5 - NC_052627.1Genomic Context describing neighboring genes Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase Neighboring gene uncharacterized LOC120406405 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene uncharacterized LOC120406406 Neighboring gene transmembrane emp24 domain-containing protein 11-like Neighboring gene spondin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052627.1 Chromosome 5 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052627.1 Reference ASM1616193v1 Primary Assembly

    Range
    123337045..123612023
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039541229.1 → XP_039397163.1  C-terminal-binding protein 1 isoform X5

    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_039541239.1 → XP_039397173.1  C-terminal-binding protein 1 isoform X10

    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_039541233.1 → XP_039397167.1  C-terminal-binding protein 1 isoform X7

    Conserved Domains (1) summary
    cd05299
    Location:26 → 344
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. XM_039541234.1 → XP_039397168.1  C-terminal-binding protein 1 isoform X8

    Conserved Domains (1) summary
    cd05299
    Location:20 → 338
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  5. XM_039541236.1 → XP_039397170.1  C-terminal-binding protein 1 isoform X9

    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  6. XM_039541228.1 → XP_039397162.1  C-terminal-binding protein 1 isoform X4

    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  7. XM_039541231.1 → XP_039397165.1  C-terminal-binding protein 1 isoform X7

    Conserved Domains (1) summary
    cd05299
    Location:26 → 344
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  8. XM_039541230.1 → XP_039397164.1  C-terminal-binding protein 1 isoform X6

    Conserved Domains (1) summary
    cd05299
    Location:28 → 346
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  9. XM_039541237.1 → XP_039397171.1  C-terminal-binding protein 1 isoform X9

    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  10. XM_039541224.1 → XP_039397158.1  C-terminal-binding protein 1 isoform X1

    Conserved Domains (1) summary
    cd05299
    Location:57 → 375
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  11. XM_039541225.1 → XP_039397159.1  C-terminal-binding protein 1 isoform X2

    Conserved Domains (1) summary
    cd05299
    Location:57 → 375
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  12. XM_039541226.1 → XP_039397160.1  C-terminal-binding protein 1 isoform X3

    Conserved Domains (1) summary
    cd05299
    Location:57 → 373
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  13. XM_039541232.1 → XP_039397166.1  C-terminal-binding protein 1 isoform X7

    Conserved Domains (1) summary
    cd05299
    Location:26 → 344
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  14. XM_039541235.1 → XP_039397169.1  C-terminal-binding protein 1 isoform X9

    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
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