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LRP2BP LRP2 binding protein [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120405890, updated on 21-Mar-2024

Summary

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Gene symbol
LRP2BP
Gene description
LRP2 binding protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See LRP2BP in Genome Data Viewer
Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 5 NC_052627.1 (79898255..79930319, complement)

Linkage Group 5 - NC_052627.1Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 97 Neighboring gene uncharacterized LOC120406043 Neighboring gene sorting nexin 25 Neighboring gene ankyrin repeat domain 37 Neighboring gene UFM1 specific peptidase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052627.1 Chromosome 5 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LRP2-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052627.1 Reference ASM1616193v1 Primary Assembly

    Range
    79898255..79930319 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039539802.1 → XP_039395736.1  LRP2-binding protein isoform X3

    Conserved Domains (3) summary
    smart00671
    Location:298 → 329
    SEL1; Sel1-like repeats
    COG0790
    Location:21 → 277
    TPR; TPR repeat [Signal transduction mechanisms]
    sd00010
    Location:113 → 149
    SLR; SLR repeat [structural motif]

  2. XM_039539804.1 → XP_039395738.1  LRP2-binding protein isoform X5

    Conserved Domains (2) summary
    COG0790
    Location:66 → 259
    TPR; TPR repeat [Signal transduction mechanisms]
    sd00010
    Location:114 → 150
    SLR; SLR repeat [structural motif]

  3. XM_039539801.1 → XP_039395735.1  LRP2-binding protein isoform X2

    Conserved Domains (3) summary
    smart00671
    Location:299 → 330
    SEL1; Sel1-like repeats
    COG0790
    Location:66 → 278
    TPR; TPR repeat [Signal transduction mechanisms]
    sd00010
    Location:114 → 150
    SLR; SLR repeat [structural motif]

  4. XM_039539800.1 → XP_039395734.1  LRP2-binding protein isoform X1

    Conserved Domains (2) summary
    COG0790
    Location:46 → 188
    TPR; TPR repeat [Signal transduction mechanisms]
    sd00010
    Location:48 → 76
    SLR; SLR repeat [structural motif]

  5. XM_039539803.1 → XP_039395737.1  LRP2-binding protein isoform X4

    Conserved Domains (2) summary
    COG0790
    Location:66 → 259
    TPR; TPR repeat [Signal transduction mechanisms]
    sd00010
    Location:114 → 150
    SLR; SLR repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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