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RNF141 ring finger protein 141 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120405397, updated on 21-Mar-2024

Summary

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Gene symbol
RNF141
Gene description
ring finger protein 141
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See RNF141 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
11
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 4 NC_052626.1 (97672846..97691172)

Linkage Group 4 - NC_052626.1Genomic Context describing neighboring genes Neighboring gene inositol 1,4,5-triphosphate receptor associated 1 Neighboring gene uncharacterized LOC120405401 Neighboring gene uncharacterized LOC120405400 Neighboring gene lymphatic vessel endothelial hyaluronan receptor 1 Neighboring gene uncharacterized LOC120403869 Neighboring gene adenosine monophosphate deaminase 3 Neighboring gene adrenomedullin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052626.1 Chromosome 4 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein autoubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RING finger protein 141

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052626.1 Reference ASM1616193v1 Primary Assembly

    Range
    97672846..97691172
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039538998.1 → XP_039394932.1  RING finger protein 141

    Conserved Domains (2) summary
    COG5540
    Location:104 → 195
    COG5540; RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
    cd16545
    Location:153 → 192
    RING-HC_RNF141; RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins

  2. XM_039539000.1 → XP_039394934.1  RING finger protein 141

    Conserved Domains (2) summary
    COG5540
    Location:104 → 195
    COG5540; RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
    cd16545
    Location:153 → 192
    RING-HC_RNF141; RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins

  3. XM_039539002.1 → XP_039394936.1  RING finger protein 141

    Conserved Domains (2) summary
    COG5540
    Location:104 → 195
    COG5540; RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
    cd16545
    Location:153 → 192
    RING-HC_RNF141; RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins

  4. XM_039539006.1 → XP_039394940.1  RING finger protein 141

    Conserved Domains (2) summary
    COG5540
    Location:104 → 195
    COG5540; RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
    cd16545
    Location:153 → 192
    RING-HC_RNF141; RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins

  5. XM_039539003.1 → XP_039394937.1  RING finger protein 141

    Conserved Domains (2) summary
    COG5540
    Location:104 → 195
    COG5540; RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
    cd16545
    Location:153 → 192
    RING-HC_RNF141; RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins

  6. XM_039538999.1 → XP_039394933.1  RING finger protein 141

    Conserved Domains (2) summary
    COG5540
    Location:104 → 195
    COG5540; RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
    cd16545
    Location:153 → 192
    RING-HC_RNF141; RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins

  7. XM_039538997.1 → XP_039394931.1  RING finger protein 141

    Conserved Domains (2) summary
    COG5540
    Location:104 → 195
    COG5540; RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
    cd16545
    Location:153 → 192
    RING-HC_RNF141; RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins

  8. XM_039539004.1 → XP_039394938.1  RING finger protein 141

    Conserved Domains (2) summary
    COG5540
    Location:104 → 195
    COG5540; RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
    cd16545
    Location:153 → 192
    RING-HC_RNF141; RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins

  9. XM_039539001.1 → XP_039394935.1  RING finger protein 141

    Conserved Domains (2) summary
    COG5540
    Location:104 → 195
    COG5540; RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
    cd16545
    Location:153 → 192
    RING-HC_RNF141; RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins

  10. XM_039539005.1 → XP_039394939.1  RING finger protein 141

    Conserved Domains (2) summary
    COG5540
    Location:104 → 195
    COG5540; RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
    cd16545
    Location:153 → 192
    RING-HC_RNF141; RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins

  11. XM_039539007.1 → XP_039394941.1  RING finger protein 141

    Conserved Domains (2) summary
    COG5540
    Location:104 → 195
    COG5540; RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
    cd16545
    Location:153 → 192
    RING-HC_RNF141; RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins

  12. XM_039539008.1 → XP_039394942.1  RING finger protein 141

    Conserved Domains (2) summary
    COG5540
    Location:104 → 195
    COG5540; RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
    cd16545
    Location:153 → 192
    RING-HC_RNF141; RING finger, HC subclass, found in RING finger protein 141 (RNF141) and similar proteins
Nucleotide Protein
Heading Accession and Version

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