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GANC glucosidase alpha, neutral C [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120403528, updated on 21-Mar-2024

Summary

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Gene symbol
GANC
Gene description
glucosidase alpha, neutral C
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See GANC in Genome Data Viewer
Location:
chromosome: 4
Exon count:
27
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 4 NC_052626.1 (62538817..62589416)

Linkage Group 4 - NC_052626.1Genomic Context describing neighboring genes Neighboring gene VPS39 subunit of HOPS complex Neighboring gene transmembrane protein 87A Neighboring gene calpain 3 Neighboring gene zinc finger protein 106

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052626.1 Chromosome 4 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neutral alpha-glucosidase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052626.1 Reference ASM1616193v1 Primary Assembly

    Range
    62538817..62589416
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039534673.1 → XP_039390607.1  neutral alpha-glucosidase C isoform X4

    Conserved Domains (2) summary
    cd06603
    Location:306 → 773
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:166 → 306
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  2. XM_039534674.1 → XP_039390608.1  neutral alpha-glucosidase C isoform X5

    Conserved Domains (2) summary
    cd06603
    Location:264 → 731
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:124 → 264
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  3. XM_039534670.1 → XP_039390604.1  neutral alpha-glucosidase C isoform X1

    Conserved Domains (2) summary
    cd06603
    Location:354 → 821
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:214 → 354
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  4. XM_039534671.1 → XP_039390605.1  neutral alpha-glucosidase C isoform X2

    Conserved Domains (2) summary
    cd06603
    Location:354 → 821
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:214 → 354
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  5. XM_039534672.1 → XP_039390606.1  neutral alpha-glucosidase C isoform X3

    Conserved Domains (2) summary
    cd06603
    Location:354 → 787
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:214 → 354
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  6. XM_039534680.1 → XP_039390614.1  neutral alpha-glucosidase C isoform X9

    Conserved Domains (2) summary
    cd14752
    Location:214 → 354
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
    cl38930
    Location:354 → 554
    AmyAc_family; Alpha amylase catalytic domain family

  7. XM_039534681.1 → XP_039390615.1  neutral alpha-glucosidase C isoform X10

    Conserved Domains (2) summary
    cd14752
    Location:214 → 354
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
    cl38930
    Location:354 → 554
    AmyAc_family; Alpha amylase catalytic domain family

  8. XM_039534677.1 → XP_039390611.1  neutral alpha-glucosidase C isoform X7

    Conserved Domains (2) summary
    cd06603
    Location:247 → 714
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:107 → 247
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  9. XM_039534676.1 → XP_039390610.1  neutral alpha-glucosidase C isoform X6

    Conserved Domains (2) summary
    cd06603
    Location:264 → 731
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:124 → 264
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  10. XM_039534678.1 → XP_039390612.1  neutral alpha-glucosidase C isoform X7

    Conserved Domains (2) summary
    cd06603
    Location:247 → 714
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:107 → 247
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  11. XM_039534679.1 → XP_039390613.1  neutral alpha-glucosidase C isoform X8

    Conserved Domains (2) summary
    cd06603
    Location:171 → 638
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:31 → 171
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
Nucleotide Protein
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