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CEP170 centrosomal protein 170 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120401024, updated on 21-Mar-2024

Summary

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Gene symbol
CEP170
Gene description
centrosomal protein 170
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See CEP170 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
20
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 3 NC_052625.1 (72627204..72826091)

Linkage Group 3 - NC_052625.1Genomic Context describing neighboring genes Neighboring gene AKT serine/threonine kinase 3 Neighboring gene uncharacterized LOC120401030 Neighboring gene SHH signaling and ciliogenesis regulator SDCCAG8 Neighboring gene taste receptor type 2 member 40-like Neighboring gene taste receptor type 2 member 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052625.1 Chromosome 3 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein of 170 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052625.1 Reference ASM1616193v1 Primary Assembly

    Range
    72627204..72826091
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039530488.1 → XP_039386422.1  centrosomal protein of 170 kDa isoform X1

    Conserved Domains (2) summary
    cd00060
    Location:5 → 98
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam15308
    Location:887 → 1603
    CEP170_C; CEP170 C-terminus

  2. XM_039530494.1 → XP_039386428.1  centrosomal protein of 170 kDa isoform X6

    Conserved Domains (2) summary
    cd00060
    Location:5 → 98
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam15308
    Location:887 → 1576
    CEP170_C; CEP170 C-terminus

  3. XM_039530491.1 → XP_039386425.1  centrosomal protein of 170 kDa isoform X3

    Conserved Domains (2) summary
    cd00060
    Location:5 → 98
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam15308
    Location:887 → 1593
    CEP170_C; CEP170 C-terminus

  4. XM_039530492.1 → XP_039386426.1  centrosomal protein of 170 kDa isoform X4

    Conserved Domains (2) summary
    cd00060
    Location:5 → 98
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam15308
    Location:887 → 1586
    CEP170_C; CEP170 C-terminus

  5. XM_039530497.1 → XP_039386431.1  centrosomal protein of 170 kDa isoform X9

    Conserved Domains (2) summary
    cd00060
    Location:5 → 98
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam15308
    Location:887 → 1550
    CEP170_C; CEP170 C-terminus

  6. XM_039530496.1 → XP_039386430.1  centrosomal protein of 170 kDa isoform X8

    Conserved Domains (2) summary
    cd00060
    Location:5 → 98
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam15308
    Location:837 → 1553
    CEP170_C; CEP170 C-terminus

  7. XM_039530489.1 → XP_039386423.1  centrosomal protein of 170 kDa isoform X1

    Conserved Domains (2) summary
    cd00060
    Location:5 → 98
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam15308
    Location:887 → 1603
    CEP170_C; CEP170 C-terminus

  8. XM_039530490.1 → XP_039386424.1  centrosomal protein of 170 kDa isoform X2

    Conserved Domains (2) summary
    cd00060
    Location:5 → 98
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam15308
    Location:887 → 1593
    CEP170_C; CEP170 C-terminus

  9. XM_039530495.1 → XP_039386429.1  centrosomal protein of 170 kDa isoform X7

    Conserved Domains (2) summary
    cd00060
    Location:5 → 98
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam15308
    Location:887 → 1567
    CEP170_C; CEP170 C-terminus

  10. XM_039530493.1 → XP_039386427.1  centrosomal protein of 170 kDa isoform X5

    Conserved Domains (2) summary
    cd00060
    Location:5 → 98
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam15308
    Location:887 → 1576
    CEP170_C; CEP170 C-terminus

  11. XM_039530498.1 → XP_039386432.1  centrosomal protein of 170 kDa isoform X10

    Conserved Domains (2) summary
    cd00060
    Location:5 → 98
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam15308
    Location:728 → 1444
    CEP170_C; CEP170 C-terminus
Nucleotide Protein
Heading Accession and Version

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