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LBR lamin B receptor [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120400986, updated on 21-Mar-2024

Summary

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Gene symbol
LBR
Gene description
lamin B receptor
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See LBR in Genome Data Viewer
Location:
chromosome: 3
Exon count:
16
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 3 NC_052625.1 (54288483..54319902, complement)

Linkage Group 3 - NC_052625.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120400057 Neighboring gene cornichon family AMPA receptor auxiliary protein 3 Neighboring gene dynein axonemal heavy chain 14 Neighboring gene uncharacterized LOC120400987 Neighboring gene ENAH actin regulator Neighboring gene uncharacterized LOC120401536

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052625.1 Chromosome 3 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta(14)-sterol reductase LBR

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052625.1 Reference ASM1616193v1 Primary Assembly

    Range
    54288483..54319902 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039530406.1 → XP_039386340.1  delta(14)-sterol reductase LBR isoform X2

    Conserved Domains (2) summary
    pfam09465
    Location:1 → 55
    LBR_tudor; Lamin-B receptor of TUDOR domain
    cl21511
    Location:182 → 605
    PEMT; Phospholipid methyltransferase

  2. XM_039530402.1 → XP_039386336.1  delta(14)-sterol reductase LBR isoform X1

    Conserved Domains (2) summary
    pfam09465
    Location:1 → 55
    LBR_tudor; Lamin-B receptor of TUDOR domain
    cl21511
    Location:183 → 606
    PEMT; Phospholipid methyltransferase

  3. XM_039530403.1 → XP_039386337.1  delta(14)-sterol reductase LBR isoform X1

    Conserved Domains (2) summary
    pfam09465
    Location:1 → 55
    LBR_tudor; Lamin-B receptor of TUDOR domain
    cl21511
    Location:183 → 606
    PEMT; Phospholipid methyltransferase

  4. XM_039530404.1 → XP_039386338.1  delta(14)-sterol reductase LBR isoform X1

    Conserved Domains (2) summary
    pfam09465
    Location:1 → 55
    LBR_tudor; Lamin-B receptor of TUDOR domain
    cl21511
    Location:183 → 606
    PEMT; Phospholipid methyltransferase
Nucleotide Protein
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