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TAB2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120400767, updated on 21-Mar-2024

Summary

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Gene symbol
TAB2
Gene description
TGF-beta activated kinase 1 (MAP3K7) binding protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See TAB2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
16
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 3 NC_052625.1 (99221963..99372227, complement)

Linkage Group 3 - NC_052625.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120400619 Neighboring gene peptidylprolyl isomerase like 4 Neighboring gene zinc finger CCCH-type containing 12D Neighboring gene uncharacterized LOC120402368 Neighboring gene uncharacterized LOC120402365 Neighboring gene uronyl 2-sulfotransferase Neighboring gene U1 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052625.1 Chromosome 3 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052625.1 Reference ASM1616193v1 Primary Assembly

    Range
    99221963..99372227 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039529737.1 → XP_039385671.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    Conserved Domains (5) summary
    smart00547
    Location:672 → 695
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:541 → 618
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:673 → 692
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:201 → 466
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  2. XM_039529734.1 → XP_039385668.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    Conserved Domains (5) summary
    smart00547
    Location:672 → 695
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:541 → 618
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:673 → 692
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:201 → 466
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  3. XM_039529733.1 → XP_039385667.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    Conserved Domains (5) summary
    smart00547
    Location:672 → 695
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:541 → 618
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:673 → 692
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:201 → 466
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  4. XM_039529736.1 → XP_039385670.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    Conserved Domains (5) summary
    smart00547
    Location:672 → 695
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:541 → 618
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:673 → 692
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:201 → 466
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  5. XM_039529739.1 → XP_039385673.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    Conserved Domains (5) summary
    smart00547
    Location:672 → 695
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:541 → 618
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:673 → 692
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:201 → 466
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  6. XM_039529731.1 → XP_039385665.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    Conserved Domains (5) summary
    smart00547
    Location:672 → 695
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:541 → 618
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:673 → 692
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:201 → 466
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  7. XM_039529732.1 → XP_039385666.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    Conserved Domains (5) summary
    smart00547
    Location:672 → 695
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:541 → 618
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:673 → 692
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:201 → 466
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  8. XM_039529735.1 → XP_039385669.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    Conserved Domains (5) summary
    smart00547
    Location:672 → 695
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:541 → 618
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:673 → 692
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:201 → 466
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  9. XM_039529742.1 → XP_039385676.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X4

    Conserved Domains (3) summary
    smart00547
    Location:598 → 621
    ZnF_RBZ; Zinc finger domain
    TIGR04523
    Location:467 → 544
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:599 → 618
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  10. XM_039529740.1 → XP_039385674.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2

    Conserved Domains (3) summary
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:541 → 618
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:201 → 466
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  11. XM_039529741.1 → XP_039385675.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X3

    Conserved Domains (3) summary
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:541 → 618
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:201 → 466
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
Nucleotide Protein
Heading Accession and Version

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