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XYLB xylulokinase [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120399216, updated on 11-Apr-2024

Summary

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Gene symbol
XYLB
Gene description
xylulokinase
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See XYLB in Genome Data Viewer
Location:
chromosome: 2
Exon count:
22
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 2 NC_052624.1 (15466682..15607452, complement)

Linkage Group 2 - NC_052624.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120396645 Neighboring gene uncharacterized LOC120396648 Neighboring gene chromosome 2 C9orf152 homolog Neighboring gene negative regulator of ubiquitin like proteins 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052624.1 Chromosome 2 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-xylulokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-xylose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xylulose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylulose kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052624.1 Reference ASM1616193v1 Primary Assembly

    Range
    15466682..15607452 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039527262.1 → XP_039383196.1  xylulose kinase isoform X1

    Conserved Domains (1) summary
    cd07776
    Location:8 → 478
    FGGY_D-XK_euk; eukaryotic D-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases

  2. XM_039527264.1 → XP_039383198.1  xylulose kinase isoform X2

    Conserved Domains (1) summary
    cd07776
    Location:8 → 422
    FGGY_D-XK_euk; eukaryotic D-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases

  3. XM_039527267.1 → XP_039383201.1  xylulose kinase isoform X3

    Conserved Domains (1) summary
    cd07776
    Location:1 → 413
    FGGY_D-XK_euk; eukaryotic D-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases

  4. XM_039527268.1 → XP_039383202.1  xylulose kinase isoform X3

    Conserved Domains (1) summary
    cd07776
    Location:1 → 413
    FGGY_D-XK_euk; eukaryotic D-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases

  5. XM_039527265.1 → XP_039383199.1  xylulose kinase isoform X3

    Conserved Domains (1) summary
    cd07776
    Location:1 → 413
    FGGY_D-XK_euk; eukaryotic D-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases

  6. XM_039527266.1 → XP_039383200.1  xylulose kinase isoform X4

    Conserved Domains (1) summary
    cd07776
    Location:8 → 429
    FGGY_D-XK_euk; eukaryotic D-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases
Nucleotide Protein
Heading Accession and Version

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