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SQLE squalene epoxidase [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120399202, updated on 21-Mar-2024

Summary

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Gene symbol
SQLE
Gene description
squalene epoxidase
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See SQLE in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 2 NC_052624.1 (266938412..266965698)

Linkage Group 2 - NC_052624.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120397054 Neighboring gene small nucleolar RNA U3 Neighboring gene small nucleolar RNA U3 Neighboring gene small nucleolar RNA U3 Neighboring gene WASH complex subunit 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052624.1 Chromosome 2 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables squalene monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
squalene monooxygenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052624.1 Reference ASM1616193v1 Primary Assembly

    Range
    266938412..266965698
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039527230.1 → XP_039383164.1  squalene monooxygenase

    Conserved Domains (2) summary
    PRK07045
    Location:124 → 426
    PRK07045; putative monooxygenase; Reviewed
    cl21454
    Location:276 → 547
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
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Gene LinkOut

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