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SACM1L SAC1 like phosphatidylinositide phosphatase [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120398083, updated on 21-Mar-2024

Summary

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Gene symbol
SACM1L
Gene description
SAC1 like phosphatidylinositide phosphatase
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See SACM1L in Genome Data Viewer
Location:
chromosome: 2
Exon count:
20
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 2 NC_052624.1 (80724410..80779913, complement)

Linkage Group 2 - NC_052624.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 6 member 20 Neighboring gene uncharacterized LOC120398124 Neighboring gene small nuclear ribonucleoprotein Sm D1 Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene LIM domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052624.1 Chromosome 2 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-4-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol-3-phosphatase SAC1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052624.1 Reference ASM1616193v1 Primary Assembly

    Range
    80724410..80779913 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039525095.1 → XP_039381029.1  phosphatidylinositol-3-phosphatase SAC1

    Conserved Domains (1) summary
    COG5329
    Location:59 → 521
    COG5329; Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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