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ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120397585, updated on 21-Mar-2024

Summary

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Gene symbol
ASAP1
Gene description
ArfGAP with SH3 domain, ankyrin repeat and PH domain 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See ASAP1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
35
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 2 NC_052624.1 (269636445..269959654, complement)

Linkage Group 2 - NC_052624.1Genomic Context describing neighboring genes Neighboring gene CYFIP related Rac1 interactor B Neighboring gene uncharacterized LOC120397003 Neighboring gene elongation factor 1-alpha-like Neighboring gene uncharacterized LOC120397586 Neighboring gene uncharacterized LOC120399259 Neighboring gene adenylate cyclase 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052624.1 Chromosome 2 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052624.1 Reference ASM1616193v1 Primary Assembly

    Range
    269636445..269959654 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039523658.1 → XP_039379592.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1

    Conserved Domains (7) summary
    cd07641
    Location:55 → 269
    BAR_ASAP1; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1
    cd11965
    Location:1093 → 1149
    SH3_ASAP1; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 1
    PHA03247
    Location:728 → 1046
    PHA03247; large tegument protein UL36; Provisional
    cd13251
    Location:320 → 426
    PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
    sd00045
    Location:605 → 638
    ANK; ANK repeat [structural motif]
    cd08848
    Location:441 → 562
    ArfGap_ASAP1; ArfGAP domain of ASAP1 (ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein 1)
    pfam12796
    Location:609 → 693
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_039523659.1 → XP_039379593.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X2

    Conserved Domains (7) summary
    cd07641
    Location:55 → 269
    BAR_ASAP1; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1
    cd11965
    Location:1090 → 1146
    SH3_ASAP1; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 1
    PHA03247
    Location:725 → 1043
    PHA03247; large tegument protein UL36; Provisional
    cd13251
    Location:317 → 423
    PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
    sd00045
    Location:602 → 635
    ANK; ANK repeat [structural motif]
    cd08848
    Location:438 → 559
    ArfGap_ASAP1; ArfGAP domain of ASAP1 (ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein 1)
    pfam12796
    Location:606 → 690
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_039523657.1 → XP_039379591.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1

    Conserved Domains (7) summary
    cd07641
    Location:55 → 269
    BAR_ASAP1; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1
    cd11965
    Location:1093 → 1149
    SH3_ASAP1; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 1
    PHA03247
    Location:728 → 1046
    PHA03247; large tegument protein UL36; Provisional
    cd13251
    Location:320 → 426
    PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
    sd00045
    Location:605 → 638
    ANK; ANK repeat [structural motif]
    cd08848
    Location:441 → 562
    ArfGap_ASAP1; ArfGAP domain of ASAP1 (ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein 1)
    pfam12796
    Location:609 → 693
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_039523660.1 → XP_039379594.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X3

    Conserved Domains (7) summary
    cd07641
    Location:34 → 248
    BAR_ASAP1; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1
    cd11965
    Location:1072 → 1128
    SH3_ASAP1; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 1
    PHA03247
    Location:707 → 1025
    PHA03247; large tegument protein UL36; Provisional
    cd13251
    Location:299 → 405
    PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
    sd00045
    Location:584 → 617
    ANK; ANK repeat [structural motif]
    cd08848
    Location:420 → 541
    ArfGap_ASAP1; ArfGAP domain of ASAP1 (ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein 1)
    pfam12796
    Location:588 → 672
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
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