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PTP4A3 protein tyrosine phosphatase 4A3 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120397078, updated on 21-Mar-2024

Summary

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Gene symbol
PTP4A3
Gene description
protein tyrosine phosphatase 4A3
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See PTP4A3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
15
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 2 NC_052624.1 (278711470..278873544, complement)

Linkage Group 2 - NC_052624.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120396549 Neighboring gene serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like Neighboring gene uncharacterized LOC120397080 Neighboring gene uncharacterized LOC120398317 Neighboring gene uncharacterized LOC120399591

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052624.1 Chromosome 2 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine/serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endothelial cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein tyrosine phosphatase type IVA 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052624.1 Reference ASM1616193v1 Primary Assembly

    Range
    278711470..278873544 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039522537.1 → XP_039378471.1  protein tyrosine phosphatase type IVA 3 isoform X1

    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  2. XM_039522540.1 → XP_039378474.1  protein tyrosine phosphatase type IVA 3 isoform X1

    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  3. XM_039522536.1 → XP_039378470.1  protein tyrosine phosphatase type IVA 3 isoform X1

    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  4. XM_039522538.1 → XP_039378472.1  protein tyrosine phosphatase type IVA 3 isoform X1

    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  5. XM_039522547.1 → XP_039378481.1  protein tyrosine phosphatase type IVA 3 isoform X2

    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  6. XM_039522541.1 → XP_039378475.1  protein tyrosine phosphatase type IVA 3 isoform X1

    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  7. XM_039522545.1 → XP_039378479.1  protein tyrosine phosphatase type IVA 3 isoform X1

    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  8. XM_039522543.1 → XP_039378477.1  protein tyrosine phosphatase type IVA 3 isoform X1

    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  9. XM_039522539.1 → XP_039378473.1  protein tyrosine phosphatase type IVA 3 isoform X1

    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  10. XM_039522546.1 → XP_039378480.1  protein tyrosine phosphatase type IVA 3 isoform X1

    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3

  11. XM_039522542.1 → XP_039378476.1  protein tyrosine phosphatase type IVA 3 isoform X1

    Conserved Domains (1) summary
    cd18535
    Location:5 → 158
    PTP-IVa3; protein tyrosine phosphatase type IVA 3
Nucleotide Protein
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