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DHX8 DEAH-box helicase 8 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120392044, updated on 21-Mar-2024

Summary

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Gene symbol
DHX8
Gene description
DEAH-box helicase 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See DHX8 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
24
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 27 NC_052649.1 (9546577..9564854)

Linkage Group 27 - NC_052649.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene ADP ribosylation factor like GTPase 4D Neighboring gene ETS variant transcription factor 4 Neighboring gene mesenchyme homeobox 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052649.1 Chromosome 27 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spliceosomal complex disassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase DHX8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052649.1 Reference ASM1616193v1 Primary Assembly

    Range
    9546577..9564854
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039516367.1 → XP_039372301.1  ATP-dependent RNA helicase DHX8 isoform X2

    Conserved Domains (4) summary
    COG0539
    Location:202 → 360
    RpsA; Ribosomal protein S1 [Translation, ribosomal structure and biogenesis]
    COG1643
    Location:490 → 1157
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    cd05684
    Location:203 → 281
    S1_DHX8_helicase; The N-terminal S1 domain of human ATP-dependent RNA helicase DHX8, a DEAH (Asp-Glu-Ala-His) box polypeptide. The DEAH-box RNA helicases are thought to play key roles in pre-mRNA splicing and DHX8 facilitates nuclear export of spliced mRNA by releasing ...
    cl41749
    Location:3 → 46
    GH2_like; GIPC homology 2 (GH2) domain-like family

  2. XM_039516366.1 → XP_039372300.1  ATP-dependent RNA helicase DHX8 isoform X1

    Conserved Domains (4) summary
    COG0539
    Location:246 → 404
    RpsA; Ribosomal protein S1 [Translation, ribosomal structure and biogenesis]
    COG1643
    Location:534 → 1201
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    cd05684
    Location:247 → 325
    S1_DHX8_helicase; The N-terminal S1 domain of human ATP-dependent RNA helicase DHX8, a DEAH (Asp-Glu-Ala-His) box polypeptide. The DEAH-box RNA helicases are thought to play key roles in pre-mRNA splicing and DHX8 facilitates nuclear export of spliced mRNA by releasing ...
    cd21691
    Location:23 → 90
    GH2-like_DHX8; GIPC-homology 2 (GH2)-like domain found in DEAH box protein 8 (DHX8) and similar proteins

  3. XM_039516368.1 → XP_039372302.1  ATP-dependent RNA helicase DHX8 isoform X3

    Conserved Domains (3) summary
    COG0539
    Location:157 → 315
    RpsA; Ribosomal protein S1 [Translation, ribosomal structure and biogenesis]
    COG1643
    Location:445 → 1112
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    cd05684
    Location:158 → 236
    S1_DHX8_helicase; The N-terminal S1 domain of human ATP-dependent RNA helicase DHX8, a DEAH (Asp-Glu-Ala-His) box polypeptide. The DEAH-box RNA helicases are thought to play key roles in pre-mRNA splicing and DHX8 facilitates nuclear export of spliced mRNA by releasing ...
Nucleotide Protein
Heading Accession and Version

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