U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

KIRREL1 kirre like nephrin family adhesion molecule 1 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120390510, updated on 21-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
KIRREL1
Gene description
kirre like nephrin family adhesion molecule 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See KIRREL1 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
16
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 24 NC_052646.1 (3155034..3238232)

Linkage Group 24 - NC_052646.1Genomic Context describing neighboring genes Neighboring gene SLAM family member 5-like Neighboring gene uncharacterized LOC120390084 Neighboring gene SLAM family member 8-like Neighboring gene hepatocyte cell adhesion molecule-like Neighboring gene T-lymphocyte surface antigen Ly-9-like Neighboring gene uncharacterized LOC120390651

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_052646.1 Chromosome 24 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
kin of IRRE-like protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052646.1 Reference ASM1616193v1 Primary Assembly

    Range
    3155034..3238232
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039513242.1 → XP_039369176.1  kin of IRRE-like protein 1 isoform X1

    Conserved Domains (5) summary
    smart00410
    Location:30 → 119
    IG_like; Immunoglobulin like
    pfam13927
    Location:311 → 376
    Ig_3; Immunoglobulin domain
    cd00096
    Location:328 → 332
    Ig; Ig strand B [structural motif]
    cd05759
    Location:125 → 222
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:394 → 491
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains

  2. XM_039513243.1 → XP_039369177.1  kin of IRRE-like protein 1 isoform X2

    Conserved Domains (5) summary
    smart00409
    Location:12 → 55
    IG; Immunoglobulin
    pfam13927
    Location:247 → 312
    Ig_3; Immunoglobulin domain
    cd00096
    Location:264 → 268
    Ig; Ig strand B [structural motif]
    cd05759
    Location:61 → 158
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:330 → 427
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.