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LYPLA2 lysophospholipase 2 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120389353, updated on 21-Mar-2024

Summary

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Gene symbol
LYPLA2
Gene description
lysophospholipase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See LYPLA2 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
13
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 23 NC_052645.1 (15938151..15953599, complement)

Linkage Group 23 - NC_052645.1Genomic Context describing neighboring genes Neighboring gene hydroxymethylglutaryl-CoA lyase, mitochondrial Neighboring gene alpha-L-fucosidase 1 Neighboring gene uncharacterized LOC120389312 Neighboring gene PITH domain containing 1 Neighboring gene elongin A Neighboring gene kelch-like protein 31

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052645.1 Chromosome 23 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carboxylic ester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables palmitoyl-(protein) hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein depalmitoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-protein thioesterase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052645.1 Reference ASM1616193v1 Primary Assembly

    Range
    15938151..15953599 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039511871.1 → XP_039367805.1  acyl-protein thioesterase 2 isoform X2

    Conserved Domains (1) summary
    pfam02230
    Location:11 → 229
    Abhydrolase_2; Phospholipase/Carboxylesterase

  2. XM_039511870.1 → XP_039367804.1  acyl-protein thioesterase 2 isoform X1

    Conserved Domains (1) summary
    pfam02230
    Location:31 → 249
    Abhydrolase_2; Phospholipase/Carboxylesterase

  3. XM_039511872.1 → XP_039367806.1  acyl-protein thioesterase 2 isoform X2

    Conserved Domains (1) summary
    pfam02230
    Location:11 → 229
    Abhydrolase_2; Phospholipase/Carboxylesterase

  4. XM_039511873.1 → XP_039367807.1  acyl-protein thioesterase 2 isoform X3

    Conserved Domains (1) summary
    cl21494
    Location:1 → 162
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
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