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PTGDS prostaglandin D2 synthase [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120386556, updated on 21-Mar-2024

Summary

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Gene symbol
PTGDS
Gene description
prostaglandin D2 synthase
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See PTGDS in Genome Data Viewer
Location:
chromosome: 19
Exon count:
7
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 19 NC_052641.1 (4047336..4055730)

Linkage Group 19 - NC_052641.1Genomic Context describing neighboring genes Neighboring gene TNF receptor associated factor 2 Neighboring gene F-box and WD repeat domain containing 5 Neighboring gene complement C8 gamma chain Neighboring gene lipocalin 15 Neighboring gene B-box and SPRY domain containing

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052641.1 Chromosome 19 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prostaglandin-H2 D-isomerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052641.1 Reference ASM1616193v1 Primary Assembly

    Range
    4047336..4055730
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039505934.1 → XP_039361868.1  prostaglandin-H2 D-isomerase

    Conserved Domains (1) summary
    cd19419
    Location:25 → 182
    lipocalin_L-PGDS; lipocalin-type prostaglandin D synthase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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