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MTHFSD methenyltetrahydrofolate synthetase domain containing [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120384863, updated on 21-Mar-2024

Summary

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Gene symbol
MTHFSD
Gene description
methenyltetrahydrofolate synthetase domain containing
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See MTHFSD in Genome Data Viewer
Location:
chromosome: 16
Exon count:
11
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 16 NC_052638.1 (37248788..37270463)

Linkage Group 16 - NC_052638.1Genomic Context describing neighboring genes Neighboring gene forkhead box L1 Neighboring gene forkhead box C2 Neighboring gene forkhead box F1 Neighboring gene uncharacterized LOC120384158

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052638.1 Chromosome 16 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methenyltetrahydrofolate synthase domain-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052638.1 Reference ASM1616193v1 Primary Assembly

    Range
    37248788..37270463
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039503987.1 → XP_039359921.1  methenyltetrahydrofolate synthase domain-containing protein isoform X4

    Conserved Domains (2) summary
    cd12270
    Location:308 → 379
    RRM_MTHFSD; RNA recognition motif (RRM) found in vertebrate methenyltetrahydrofolate synthetase domain-containing proteins
    cl00360
    Location:5 → 202
    5-FTHF_cyc-lig; 5-formyltetrahydrofolate cyclo-ligase family

  2. XM_039503986.1 → XP_039359920.1  methenyltetrahydrofolate synthase domain-containing protein isoform X3

    Conserved Domains (2) summary
    cd12270
    Location:308 → 379
    RRM_MTHFSD; RNA recognition motif (RRM) found in vertebrate methenyltetrahydrofolate synthetase domain-containing proteins
    cl00360
    Location:5 → 202
    5-FTHF_cyc-lig; 5-formyltetrahydrofolate cyclo-ligase family

  3. XM_039503985.1 → XP_039359919.1  methenyltetrahydrofolate synthase domain-containing protein isoform X2

    Conserved Domains (2) summary
    cd12270
    Location:316 → 387
    RRM_MTHFSD; RNA recognition motif (RRM) found in vertebrate methenyltetrahydrofolate synthetase domain-containing proteins
    cl00360
    Location:13 → 210
    5-FTHF_cyc-lig; 5-formyltetrahydrofolate cyclo-ligase family

  4. XM_039503984.1 → XP_039359918.1  methenyltetrahydrofolate synthase domain-containing protein isoform X1

    Conserved Domains (2) summary
    cd12270
    Location:316 → 387
    RRM_MTHFSD; RNA recognition motif (RRM) found in vertebrate methenyltetrahydrofolate synthetase domain-containing proteins
    cl00360
    Location:13 → 210
    5-FTHF_cyc-lig; 5-formyltetrahydrofolate cyclo-ligase family

  5. XM_039503988.1 → XP_039359922.1  methenyltetrahydrofolate synthase domain-containing protein isoform X5

    Conserved Domains (2) summary
    cd12270
    Location:293 → 364
    RRM_MTHFSD; RNA recognition motif (RRM) found in vertebrate methenyltetrahydrofolate synthetase domain-containing proteins
    cl00360
    Location:1 → 187
    5-FTHF_cyc-lig; 5-formyltetrahydrofolate cyclo-ligase family

  6. XM_039503989.1 → XP_039359923.1  methenyltetrahydrofolate synthase domain-containing protein isoform X5

    Conserved Domains (2) summary
    cd12270
    Location:293 → 364
    RRM_MTHFSD; RNA recognition motif (RRM) found in vertebrate methenyltetrahydrofolate synthetase domain-containing proteins
    cl00360
    Location:1 → 187
    5-FTHF_cyc-lig; 5-formyltetrahydrofolate cyclo-ligase family
Nucleotide Protein
Heading Accession and Version

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