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KERA keratocan [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120384638, updated on 21-Mar-2024

Summary

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Gene symbol
KERA
Gene description
keratocan
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See KERA in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 1 NC_052623.1 (281177414..281186026)

Linkage Group 1 - NC_052623.1Genomic Context describing neighboring genes Neighboring gene decorin Neighboring gene lumican Neighboring gene epiphycan Neighboring gene uncharacterized LOC120378472

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052623.1 Chromosome 1 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
keratocan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052623.1 Reference ASM1616193v1 Primary Assembly

    Range
    281177414..281186026
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039503618.1 → XP_039359552.1  keratocan

    Conserved Domains (2) summary
    PRK15370
    Location:28 → 321
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    sd00033
    Location:73 → 96
    LRR_RI; leucine-rich repeat [structural motif]

  2. XM_039503623.1 → XP_039359557.1  keratocan

    Conserved Domains (2) summary
    PRK15370
    Location:28 → 321
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    sd00033
    Location:73 → 96
    LRR_RI; leucine-rich repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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