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CAPNS2 calpain small subunit 2 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120384618, updated on 21-Mar-2024

Summary

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Gene symbol
CAPNS2
Gene description
calpain small subunit 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See CAPNS2 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
1
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 16 NC_052638.1 (13617164..13618460, complement)

Linkage Group 16 - NC_052638.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120384507 Neighboring gene uncharacterized LOC120384508 Neighboring gene solute carrier family 6 member 2 Neighboring gene uncharacterized LOC120384509 Neighboring gene lysophosphatidylcholine acyltransferase 2 Neighboring gene matrix metallopeptidase 2 Neighboring gene iroquois homeobox 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052638.1 Chromosome 16 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calpain small subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052638.1 Reference ASM1616193v1 Primary Assembly

    Range
    13617164..13618460 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039503585.1 → XP_039359519.1  calpain small subunit 2

    Conserved Domains (1) summary
    cd16188
    Location:79 → 247
    EFh_PEF_CPNS1_2; Penta-EF hand, calcium binding motifs, found in calcium-dependent protease small subunit CAPNS1 and CAPNS2
Nucleotide Protein
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Gene LinkOut

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